---
title: "Available signatures"
output: rmarkdown::html_vignette
vignette: >
  %\VignetteIndexEntry{available-sigs}
  %\VignetteEngine{knitr::rmarkdown}
  %\VignetteEncoding{UTF-8}
---

```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)
```

```{r setup, echo=FALSE, message=FALSE}
library(hacksig)
library(dplyr)
```

The following table is based on the output of `get_sig_info()` and it can be used 
to explore in a simple way all the implemented gene signatures in hacksig.

The search bar allows you to search for specific type of signatures and links in 
the DOI column redirect to the original papers.

```{r, echo=FALSE}
get_sig_info() |> 
    mutate(
        publication_doi = paste0(
            "<a href='https://doi.org/", publication_doi, "'>", publication_doi, "</a>"
        )
    ) |> 
    reactable::reactable(
        columns = list(
            signature_id = reactable::colDef("signature ID"),
            signature_keywords = reactable::colDef(show = FALSE, 
                                                   searchable = TRUE, 
                                                   filterable = TRUE),
            publication_doi = reactable::colDef("DOI", html = TRUE)
        ),
        searchable = TRUE,
        striped = TRUE,
        highlight = TRUE,
        defaultPageSize = 10
    )
```